Package: pollimetry 1.1.0

pollimetry: Estimate Pollinator Body Size and Co-Varying Ecological Traits

Tools to estimate pollinator body size and co-varying traits. This package contains novel Bayesian predictive models of pollinator body size (for bees and hoverflies) and bee foraging range, as well as preexisting predictive models for pollinator body size (currently implemented for ants, bees, butterflies, flies, moths and wasps), bee tongue length, foraging range, total field nectar loads and wing loading. An additional GitHub repository <https://github.com/liamkendall/pollimetrydata> provides model objects to use the bodysize and foraging.range functions internally. All models are described in Kendall et al. (2019) <doi:10.1002/ece3.4835> & Kendall et al. (2022) <doi:TBC>.

Authors:Liam Kendall [aut, cre], Ignasi Bartomeus [aut]

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pollimetry.pdf |pollimetry.html
pollimetry/json (API)

# Install 'pollimetry' in R:
install.packages('pollimetry', repos = c('https://liamkendall.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/liamkendall/pollimetry/issues

Datasets:
  • Melin_et_al_2019 - Bee tongue length measurements for 11 Melittidae bee species.
  • forage_dataset - Bee foraging range measurements for 101 bee species.
  • pollimetry_dataset - Body size and intertegular distance measurements of 4438 pollinating insect specimens.

On CRAN:

3.08 score 2 stars 12 scripts 180 downloads 1 mentions 9 exports 87 dependencies

Last updated 2 years agofrom:0d8ff0ae3b. Checks:OK: 3 ERROR: 2 NOTE: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 12 2024
R-4.5-winOKNov 12 2024
R-4.5-linuxOKNov 12 2024
R-4.4-winNOTENov 12 2024
R-4.4-macNOTENov 12 2024
R-4.3-winERRORNov 12 2024
R-4.3-macERRORNov 12 2024

Exports:bodysizeforagedistforaging.rangeheadwidthsizelengthsizelengthwidthsizenectarloadtonguelengthwingloading

Dependencies:abindaskpassbackportsbayesplotBHbridgesamplingbrmsBrobdingnagcallrcheckmateclicodacodetoolscolorspacecurldata.tabledescdigestdistributionaldplyrfansifarverfuturefuture.applygenericsggplot2ggridgesglobalsgluegridExtragtablehttrinlineisobandjsonlitelabelinglatticelifecyclelistenvloomagrittrMASSMatrixmatrixStatsmgcvmimemunsellmvtnormnleqslvnlmenumDerivopensslparallellypillarpkgbuildpkgconfigplyrposteriorprocessxpsQuickJSRR.cacheR.methodsS3R.ooR.utilsR6RColorBrewerRcppRcppEigenRcppParallelrepmisreshape2rlangrstanrstantoolsscalesStanHeadersstringistringrsystensorAtibbletidyselectutf8vctrsviridisLitewithr